Index

A

Accessible command line option

C

command line option Accessible dir_fn dt epsilon Fractal md_freq Network num_steps, [1], [2] output_freq r_intra Radius rcutoff rswitch scaling14 temp temp_nhc_length temp_nhc_tau

D

dir_fn command line option

dt command line option

E

epsilon command line option

F

Fractal command line option

M

md_freq command line option

N

Network command line option

num_steps command line option, [1], [2]

O

output_freq command line option

R

r_intra command line option Radius command line option

rcutoff command line option rswitch command line option

S

scaling14 command line option

T

temp command line option temp_nhc_length command line option

temp_nhc_tau command line option